PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS65891.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 190aa    MW: 21622.9 Da    PI: 9.3646
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS65891.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.3e-10249454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +h ++Er+RR+ +N+ +  Lr+l P +   + k+ + a+i   ++e+I++L
  EPS65891.1  2 SHIAVERNRRRMMNEHLKALRSLTPCL---YIKRGDQASIIGGVIEFINEL 49
                89*************************...9*****************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.056149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.97E-10154No hitNo description
SuperFamilySSF474598.96E-15171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-7249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.8E-12261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.8E-9455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009913Biological Processepidermal cell differentiation
GO:0010374Biological Processstomatal complex development
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MSHIAVERNR RRMMNEHLKA LRSLTPCLYI KRGDQASIIG GVIEFINELH QVLQSLEAQK  60
RRKSLSPRHH FLSRQLTQSH SQKSTHPRPG SVSSANEFRE LGACCNSEMA DVEAKISGSN  120
VHLRIFSKRS PEQLVRMIHV LEKLSFEILH LNISSMEDTV LYSFVVKIGF DCQVSVDELV  180
VEIQRTFAGS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016557389.11e-87PREDICTED: transcription factor MUTE
SwissprotQ9M8K63e-79MUTE_ARATH; Transcription factor MUTE
TrEMBLS8CMA81e-138S8CMA8_9LAMI; Uncharacterized protein (Fragment)
STRINGSolyc01g080050.2.17e-86(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA113021821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.12e-80bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]